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This site documents GECKO 4.0.0b1 (MATLAB and Python), a pre-release version. The API may still change before the stable 4.0.0 release.
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  • Migrate
  • Guide
  • API reference
  • Citations
  • GECKO (MATLAB) on GitHub
  • geckopy (Python) on GitHub

Section Navigation

  • MATLAB API (GECKO)
    • Build & edit ecModel
    • Download databases
    • Enzyme usage
    • Flux analysis
    • Gather kcats
    • Enzyme & EC data
    • Input / output
    • kcat sensitivity tuning
    • Limit proteins
    • Model adapter
    • Utilities
  • Python API (geckopy)
  • MATLAB vs Python
  • API reference
  • MATLAB API (GECKO)

MATLAB API (GECKO)#

GECKO's MATLAB functions, by category.

  • Build & edit ecModel

  • Download databases

  • Enzyme usage

  • Flux analysis

  • Gather kcats

  • Enzyme & EC data

  • Input / output

  • kcat sensitivity tuning

  • Limit proteins

  • Model adapter

  • Utilities

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Build & edit ecModel

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